kegg

type ByName []Pathway

type Compound struct {
	Entry      string
	Name       []string
	Formula    string
	Exact_Mass string
	Mol_Weight string
	Remark     string
	Comment    string
	Reaction   []string
	Pathway    []string
	Module     string
	Enzyme     []string
	Brite      string
	DBLinks    map[string]string
	Atom       []string
	Bond       []string
}

type Edge struct {
	Source int `json:"source"`
	Target int `json:"target"`
	Index  int `json:"index"`
	Weight int `json:"weight"`
}

type Gene struct {
	Id          string
	Name        string
	Definition  string
	Orthology   string
	Organism    string
	Pathways    []string
	Modules     []string
	Diseases    []string
	Drug_Target []string
	Classes     []string
	Position    string
	Motif       string
	DBLinks     map[string]string
	Structure   string
	AASEQ       Sequence
	NTSEQ       Sequence
}

type GenePathways struct {
	GeneId   string
	Pathways []string
}

type Genes []Gene

type Graph struct {
	Nodes []Node `json:"nodes"`
	Edges []Edge `json:"edges"`
}

type KeggEntry struct {
	Id       string       `xml:"id,attr"`
	Name     string       `xml:"name,attr"`
	Type     string       `xml:"type,attr"`
	Link     string       `xml:"link,attr"`
	Graphics KeggGraphics `xml:"graphics"`
}

type KeggGraphics struct {
	Name    string `xml:"name,attr"`
	Fgcolor string `xml:"fgcolor,attr"`
	Bgcolor string `xml:"bgcolor,attr"`
	Type    string `xml:"type,attr"`
	X       string `xml:"x,attr"`
	Y       string `xml:"y,attr"`
	Width   string `xml:"width,attr"`
	Height  string `xml:"height,attr"`
}

type KeggPathway struct {
	XMLName   xml.Name       `xml:"pathway"`
	Name      string         `xml:"name,attr"`
	Org       string         `xml:"org,attr"`
	Number    string         `xml:"number,attr"`
	Title     string         `xml:"title,attr"`
	Image     string         `xml:"image,attr"`
	Link      string         `xml:"link,attr"`
	Entries   []KeggEntry    `xml:"entry"`
	Relations []KeggRelation `xml:"relation"`
}

type KeggRelation struct {
	Entry1   string        `xml:"entry1,attr"`
	Entry2   string        `xml:"entry2,attr"`
	Type     string        `xml:"type,attr"`
	Subtypes []KeggSubtype `xml:"relation>subtype"`
}

type KeggSubtype struct {
	Name  string `xml:"name,attr"`
	Value string `xml:"value,attr"`
}

type Node struct {
	Id              int    `json:"id"`
	Name            string `json:"name"`
	Type            int    `json:"type"`
	Size            int    `json:"size"`
	Description     string `json:"description"`
	ForegroundColor string `json:"fgcolor"`
	BackgroundColor string `json:"bgcolor"`
	Shape           string `json:"shape"`
	X               int    `json:"x"`
	Y               int    `json:"y"`
	Height          int    `json:"height"`
	Width           int    `json:"width"`
	Fc              string `json:"fc"`
	Pvalue          string `json:"pvalue"`
}

type Pathway struct {
	Id          string
	Name        string
	Description string
	Class       string
	Pathway_Map string
	Diseases    []string
	Drugs       []string
	DBLinks     []string
	Organism    string
	Genes       []string
	Compounds   []string
}

type Sequence struct {
	Sequence string
	// contains filtered or unexported fields
}